diffloop: Identifying differential DNA loops from chromatin topology data

A suite of tools for subsetting, visualizing, annotating, and statistically analyzing the results of one or more ChIA-PET experiments or other assays that infer chromatin loops.

README.md diffloop: Identifying differential DNA loops from chromatin topology data

Vignettes Man pages API and functions Files

Package details
Author	Caleb Lareau [aut, cre], Martin Aryee [aut]
Bioconductor views	DataImport DataRepresentation GO Preprocessing QualityControl Visualization
Maintainer	Caleb Lareau <caleblareau@g.harvard.edu>
License	MIT + file LICENSE
Version	1.18.0
URL	https://github.com/aryeelab/diffloop
Package repository	View on Bioconductor
Installation	Install the latest version of this package by entering the following in R: `if (!requireNamespace("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install("diffloop")`