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The package implements an algorithm for fast gene set enrichment analysis. Using the fast algorithm allows to make more permutations and get more fine grained p-values, which allows to use accurate stantard approaches to multiple hypothesis correction.
Package details |
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| Author | Gennady Korotkevich [aut], Vladimir Sukhov [aut], Nikolay Budin [ctb], Alexey Sergushichev [aut, cre] |
| Bioconductor views | DifferentialExpression GeneExpression GeneSetEnrichment Pathways |
| Maintainer | Alexey Sergushichev <alsergbox@gmail.com> |
| License | MIT + file LICENCE |
| Version | 1.16.0 |
| URL | https://github.com/ctlab/fgsea/ |
| Package repository | View on Bioconductor |
| Installation |
Install the latest version of this package by entering the following in R:
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