flowObj: Create a flowObj object from a flowClust and flowFrame object

In flowMerge: Cluster Merging for Flow Cytometry Data

Description

Convenience method that creates a flowObj object from a flowClust and flowFrame object, so as to group the model and data together. Useful for high-throughput analysis where one may want to access the data to compute other statistics.

Usage

flowObj(flowC = NULL, flowF = NULL)

Arguments

flowC	A flowClust object representing the model fit
flowF	A flowFrame object on which the flowClust model is based.

Details

Calls the new("flowObj",..) constructor.

Value

An object of class flowObj-class

Author(s)

Greg Finak <[e-mail]>, Raphael Gottardo <[e-mail]>

References

Finak G, Bashasharti A, Brinkmann R, Gottardo R. Merging Mixture Model Components for Improved Cell Population Identification in High Throughput Flow Cytometry Data; Advances in Bioinformatics (To Appear)

See Also

flowObj-class

Examples

#data(rituximab)
#data(RituximabFlowClustFit)
#o<-flowObj(flowClust.res[[which.max(flowMerge:::BIC(flowClust.res))]],rituximab);
#m<-merge(o);

flowMerge documentation built on Nov. 8, 2020, 8:08 p.m.