Merging of mixture components for model-based automated gating of flow cytometry data using the flowClust framework. Note: users should have a working copy of flowClust 2.0 installed.
|Author||Greg Finak <email@example.com>, Raphael Gottardo <firstname.lastname@example.org>|
|Date of publication||None|
|Maintainer||Greg Finak <email@example.com>|
checkForRemoteErrors: Check output of snow clusters for errors
fitPiecewiseLinreg: Fit Piecewise Linear Regression for a list of flowMerge...
fitPiecewiseLinreg-methods: Methods for fitPiecewiseLinreg in flowMerge package
flagOutliers: Update the flagOutliers slot in a flowMerge object
flagOutliers-methods: Methods to update the flagOutliers slot in a flowMerge...
flowClust.res: A flowClust model fitted to the rituximab data for 1:10...
flowMerge-class: Class "flowMerge"
flowMerge-internal: Internal flowMerge functions
flowMerge-package: Merging of mixture components for automated gating of flow...
flowObj: Create a flowObj object from a flowClust and flowFrame object
flowObj-class: Class "flowObj"
initPFlowMerge: Initialize a SNOW cluster for use with flowMerge
map: Map matrix of probabilities to class assignments.
merge: Merge clusters in flow cytometry data
mergeClusters: Cluster merging not meant to be called by the user
mergeClusters2: Cluster merging not meant to be called by the user
merge-methods: Merge mixture components
NENT: Extract the Normalized Entropy
pFlowClust: Parallelized FlowClust
pFlowMerge: Parellel call to flowMerge
plot-methods: Methods for plotting flowMerge and flowObj classes
ptree: Generate a Function to Plot The Merging Tree
show-methods: Describe a flowObj or flowMerge object
split-methods: Split data in a flowMerge object by cluster
summary-methods: Summary methods for flowMerge
updateU: Update uncertainties