This function processes a supplied annotation object for use in a pooled screening experiment.
Originally this was processed into something special, but now it essentially returns
the original annotation object in which the geneSymbol column has been factorized. This is primarily used
internally during a call to the
ct.generateResults() function. Also performs some minor functionality checking.
If supplied, an object with
The name of a value in the
Logical indicating whether to throw an error when
A new annotation data frame, usually with nontargeting controls and NA values reformatted to
geneID set to
'no_gid'), and the "geneSymbol" column of
ann factorized. If supplied with
object, the gRNAs not present in the
object will be omitted.
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