Files in gep2pep

Creation and Analysis of Pathway Expression Profiles (PEPs)

README.md

NAMESPACE

DESCRIPTION

build/vignette.rds

R/gep2pep.R vignettes/vignette.Rmd man/loadSamplePWS.Rd man/addSingleGeneSets.Rd man/buildPEPs.Rd man/CategorizedCollection.Rd man/openRepository.Rd man/makeCollectionIDs.Rd man/getResults.Rd man/loadCollection.Rd man/createMergedRepository.Rd man/gep2pep-package.Rd man/loadSampleGEP.Rd man/clearCache.Rd man/importFromRawMode.Rd man/loadPVmatrix.Rd man/checkRepository.Rd man/createRepository.Rd man/CondSEA.Rd man/gene2pathways.Rd man/PathSEA.Rd man/as.CategorizedCollection.Rd man/setId2setName.Rd man/exportSEA.Rd man/importMSigDB.xml.Rd man/getDetails.Rd man/getCollections.Rd man/CategorizedCollection-class.Rd man/loadESmatrix.Rd tests/testthat.R tests/testthat/test_gep2pep.R tests/testthat/test_merging.R tests/testthat/test_rawMode.R

inst/NEWS

inst/doc/vignette.html

inst/doc/vignette.R inst/doc/vignette.Rmd

inst/extdata/testgep.RDS

inst/extdata/testgmd.RDS

gep2pep documentation built on Nov. 8, 2020, 5:59 p.m.