loadCollection: Loads a collection of pathways from the repository
In gep2pep: Creation and Analysis of Pathway Expression Profiles (PEPs)
Description
Usage
Arguments
Value
Examples
Description
Loads a collection of pathways from the repository
Usage
1
loadCollection(rp, collection)
Arguments
rp
A repository created by createRepository.
collection
One of the names returned by
getCollections.
Value
a GeneSetCollection object loaded from the
repository rp.
Examples
1
2
3
4
5
6
7
8
9
db <- loadSamplePWS()
repo_path <- file.path(tempdir(), "gep2pepTemp")
rp <- createRepository(repo_path, db)
geps <- loadSampleGEP()
loadCollection(rp, "c3_TFT")
unlink(repo_path, TRUE)
gep2pep documentation built on Nov. 8, 2020, 5:59 p.m.
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Description Usage Arguments Value Examples
Description
Loads a collection of pathways from the repository
Usage
1 | loadCollection(rp, collection)
|
Arguments
rp |
A repository created by |
collection |
One of the names returned by
|
Value
a GeneSetCollection object loaded from the
repository rp.
Examples
1 2 3 4 5 6 7 8 9 | db <- loadSamplePWS()
repo_path <- file.path(tempdir(), "gep2pepTemp")
rp <- createRepository(repo_path, db)
geps <- loadSampleGEP()
loadCollection(rp, "c3_TFT")
unlink(repo_path, TRUE)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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