Description Usage Arguments Value See Also Examples
The XLS output includes the full CondSEA or PathSEA results,
together with additional gene set information for the CondSEA. If
the PathSEA or CondSEA analysis was performed with
details=TRUE
, details will be reported in the XLS file. This
function requires the WriteXLS library.
1 |
rp |
A repository created by |
results |
The output of |
outname |
Name of the XLS file to be created. |
Nothing.
CondSEA, PathSEA
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 | db <- loadSamplePWS()
repo_path <- file.path(tempdir(), "gep2pepTemp")
rp <- createRepository(repo_path, db)
geps <- loadSampleGEP()
buildPEPs(rp, geps)
pgset <- c("(+)_chelidonine", "(+/_)_catechin")
psea <- CondSEA(rp, pgset)
## Not run:
exportSEA(rp, psea)
## End(Not run)
unlink(repo_path, TRUE)
|
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