globalSeq: Testing for association between RNA-Seq and high-dimensional data

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The method may be conceptualised as a test of overall significance in regression analysis, where the response variable is overdispersed and the number of explanatory variables exceeds the sample size.

Author
Armin Rauschenberger
Date of publication
None
Maintainer
Armin Rauschenberger <a.rauschenberger@vumc.nl>
License
GPL-3
Version
1.2.0

View on Bioconductor

Man pages

cursus
Genome-wide analysis
globalSeq-package
Negative binomial global test
internal
Internal functions
intern.chromo
Internal function
intern.crude
Internal function
intern.estim
Internal function
intern.matrix
Internal function
intern.permu
Internal function
intern.plot
Internal function
intern.sam
Internal function
intern.score
Internal function
intern.select
Internal function
omnibus
Omnibus test
proprius
Decomposition
toydata
Toydata

Files in this package

globalSeq/DESCRIPTION
globalSeq/NAMESPACE
globalSeq/NEWS
globalSeq/R
globalSeq/R/internal_functions.R
globalSeq/R/pkgname.R
globalSeq/R/user_functions.R
globalSeq/README.md
globalSeq/build
globalSeq/build/vignette.rds
globalSeq/data
globalSeq/data/toydata.rda
globalSeq/inst
globalSeq/inst/CITATION
globalSeq/inst/doc
globalSeq/inst/doc/globalSeq.R
globalSeq/inst/doc/globalSeq.Rnw
globalSeq/inst/doc/globalSeq.pdf
globalSeq/man
globalSeq/man/cursus.Rd
globalSeq/man/globalSeq-package.Rd
globalSeq/man/intern.chromo.Rd
globalSeq/man/intern.crude.Rd
globalSeq/man/intern.estim.Rd
globalSeq/man/intern.matrix.Rd
globalSeq/man/intern.permu.Rd
globalSeq/man/intern.plot.Rd
globalSeq/man/intern.sam.Rd
globalSeq/man/intern.score.Rd
globalSeq/man/intern.select.Rd
globalSeq/man/internal.Rd
globalSeq/man/omnibus.Rd
globalSeq/man/proprius.Rd
globalSeq/man/toydata.Rd
globalSeq/tests
globalSeq/tests/testthat
globalSeq/tests/testthat.R
globalSeq/tests/testthat/Rplots.pdf
globalSeq/tests/testthat/test.R
globalSeq/vignettes
globalSeq/vignettes/globalSeq-concordance.tex
globalSeq/vignettes/globalSeq.Rnw
globalSeq/vignettes/globalSeq.bib