pathwayGraph: Graph representing the topology of a pathway

Description Usage Arguments Value See Also Examples

View source: R/graph.R

Description

Builds a graphNEL object representing the topology of a pathway.

Usage

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pathwayGraph(pathway, edge.types=NULL)

Arguments

pathway

a Pathway object.

edge.types

keep only the edges maching the type names in this vector.

Value

A graphNEL object.

See Also

Pathway

graphNEL

Examples

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  r <- pathways("hsapiens", "reactome")
  pathwayGraph(r$`mTOR signalling`, edge.types="Binding")

graphite documentation built on May 31, 2017, 3:20 p.m.