API for iCNV
Integrated Copy Number Variation detection
| Global functions | |
|---|---|
| BAFvsZ | Source code |
| BAFvsZ_ngs | Source code |
| BAFvsZ_snp | Source code |
| HMMEM | Source code |
| HMMiEM | Source code |
| addCNVtoplot | Source code |
| addCNVtoplot1 | Source code |
| addCNVtoplot2 | Source code |
| bam.baf | Source code |
| bambaf_from_vcf | Man page Source code |
| bed_generator | Man page Source code |
| checkdim | Source code |
| chr | Man page |
| exactCN | Source code |
| exactCN_ngs | Source code |
| exactCN_snp | Source code |
| exactCNi | Source code |
| exactCNi_ngs | Source code |
| exactCNi_snp | Source code |
| filenm | Man page |
| get_array_input | Man page Source code |
| iCNV_detection | Man page Source code |
| icnv_output_to_gb | Man page Source code |
| icnv_res0 | Man page |
| ngs_baf | Man page |
| ngs_baf.chr | Man page |
| ngs_baf.id | Man page |
| ngs_baf.nm | Man page |
| ngs_baf.pos | Man page |
| ngs_plr | Man page |
| ngs_plr.pos | Man page |
| normObj | Man page |
| novisualization | Source code |
| novisualization_ngs | Source code |
| novisualization_snp | Source code |
| output_list | Man page Source code |
| plotHMMscore | Man page Source code |
| plot_intensity | Man page Source code |
| plotindi | Man page Source code |
| projname | Man page |
| qcObj | Man page |
| sampname | Man page |
| sampname_qc | Man page |
| snp_baf | Man page |
| snp_baf.pos | Man page |
| snp_lrr | Man page |
| snp_lrr.pos | Man page |
| visualization | Source code |
| visualization2 | Source code |
