dat.exp: immunoClust Meta-clustering Sample

In immunoClust: immunoClust - Automated Pipeline for Population Detection in Flow Cytometry

Description

A vector of immunoClust-objects with cell.process clustering results of five samples.

Usage

data("dat.exp")

Details

Cell-event clustering was performed on reduced (10.000 events) sample data of the dataset of immunoClust, MACS-depleted populations datasets 2010. URL http://flowrepository.org/id/FR-FCM-ZZWB.

Value

A vector of 5 immnoClust-objects for the cell clustering results of 5 FC samples.

[[1]]

CD19 MACS-depleted cells

[[2]]

CD15 MACS-depleted cells

[[3]]

CD14 MACS-depleted cells

[[4]]

CD4 MACS-depleted cells

[[4]]

CD3 MACS-depleted cells

Source

http://flowrepository.org/id/FR-FCM-ZZWB

Examples

data(dat.exp)

## process meta clustering
meta <- meta.process(dat.exp, meta.bias=0.6)

## extract event counts in the 5 samples for all meta clusters
res <- meta.numEvents(meta)

immunoClust documentation built on Nov. 8, 2020, 5:19 p.m.