dat.fcs: immunoClust Cell-clustering Sample

In immunoClust: immunoClust - Automated Pipeline for Population Detection in Flow Cytometry

Description

flowFrame data sample with 10.000 events in 7 parameters.

Usage

data(dat.fcs)

Details

This FCS sample is a reduced (10.000 events) dataset in flowFrame format of the first sample in the dataset of immunoClust, MACS-depleted populations datasets 2010. URL http://flowrepository.org/id/FR-FCM-ZZWB.

Value

A flowCore flowFrame with 10.000 observations on the following 7 parameters.

FCS-A

Forward scatter

SSC-A

Sideward scatter

FITC-A

CD14

PE-A

CD19

APC-A

CD15

APC-Cy7-A

CD4

Pacific Blue-A

CD3

Source

http://flowrepository.org/id/FR-FCM-ZZWB

Examples

data(dat.fcs)

## process cell clustering
dat.res <- cell.process(dat.fcs)

## apply asinh-transformation
dat.fcs.transformed <- trans.ApplyToData(dat.res, dat.fcs)

## plot results
splom(dat.res, dat.fcs.transformed)

immunoClust documentation built on Nov. 8, 2020, 5:19 p.m.