Description Usage Arguments Author(s)
View source: R/ratio-methods.R
Correct peptide ratios with protein ratios from a separate experiment.
1 2 3 | correct.peptide.ratios(ibspectra, peptide.quant.tbl, protein.quant.tbl,
protein.group.combined, adjust.variance = TRUE,
correlation = 0, recalculate.pvalue = TRUE)
|
ibspectra |
IBSpectra object. |
peptide.quant.tbl |
Calculated with peptideRatios. |
protein.quant.tbl |
Calculated with proteinRatios. |
protein.group.combined |
ProteinGroup object generated on both PTM and protein data. |
adjust.variance |
Adjust variance of ratios. |
correlation |
Assumed correlation between peptide and protein ratios for variance adjustment. |
recalculate.pvalue |
Recalculate p-value after variance adjustment. |
Florian P. Breitwieser
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