SVMInformation-class: SVM Information Class

Description Details Slots Author(s) References

Description

SVM Information Class

Details

Instances of this class store SVM related information.

Slots

availPackages

installed SVM packages

reqSVM

user requested SVM implementation

reqPackage

user requested package

reqSVMPar

user requested SVM parameters

reqKernel

user requested kernel

reqExplicit

user requested indictor of expl. rep. processing

reqExplicitType

user requested expl. rep. type

reqFeatureType

user requested feature type

selSVM

selected SVM implementation

selPackage

selected package

selSVMPar

selected SVM parameters

selKernel

selected kernel

selExplicit

selected indictor of expl. rep. processing

explicitKernel

kernel for explicit representation

featureWeights

indicator for feature weights

weightLimit

cutoff value for feature weights

probModel

indicator for probability model

Author(s)

Johannes Palme <[email protected]>

References

http://www.bioinf.jku.at/software/kebabs

J. Palme, S. Hochreiter, and U. Bodenhofer (2015) KeBABS: an R package for kernel-based analysis of biological sequences. Bioinformatics, 31(15):2574-2576, 2015. DOI: 10.1093/bioinformatics/btv176.


kebabs documentation built on Nov. 17, 2017, 1:20 p.m.