SVMInformation-class: SVM Information Class
In kebabs: Kernel-Based Analysis Of Biological Sequences

Description Details Slots Author(s) References

SVM Information Class

Instances of this class store SVM related information.

availPackages: installed SVM packages
reqSVM: user requested SVM implementation
reqPackage: user requested package
reqSVMPar: user requested SVM parameters
reqKernel: user requested kernel
reqExplicit: user requested indictor of expl. rep. processing
reqExplicitType: user requested expl. rep. type
reqFeatureType: user requested feature type
selSVM: selected SVM implementation
selPackage: selected package
selSVMPar: selected SVM parameters
selKernel: selected kernel
selExplicit: selected indictor of expl. rep. processing
explicitKernel: kernel for explicit representation
featureWeights: indicator for feature weights
weightLimit: cutoff value for feature weights
probModel: indicator for probability model

Johannes Palme <kebabs@bioinf.jku.at>

http://www.bioinf.jku.at/software/kebabs

J. Palme, S. Hochreiter, and U. Bodenhofer (2015) KeBABS: an R package for kernel-based analysis of biological sequences. Bioinformatics, 31(15):2574-2576, 2015. DOI: 10.1093/bioinformatics/btv176.

kebabs documentation built on Nov. 8, 2020, 7:38 p.m.

kebabs index

README.md KeBABS - An R Package for Kernel Based Analysis of Biological Sequences

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