Man pages for kebabs
Kernel-Based Analysis Of Biological Sequences

annotationSpecificKernelAnnotation Specific Kernel
BioVectorDNAVector, RNAVector, AAVector Objects and BioVector Class
BioVector-classBioVector, DNAVector, RNAVector and AAVector Classes
computeROCandAUCCompute Receiver Operating Characteristic And Area Under The...
ControlInformation-classKeBABS Control Information Class
CrossValidationResultAccessorsCrossValidationResult Accessors
CrossValidationResult-classCross Validation Result Class
evaluatePredictionEvaluate Prediction
explicitRepresentationExplict Representation
ExplicitRepresentationAccessorsExplicitRepresentation Accessors
ExplicitRepresentation-classExplicit Representation Dense and Sparse Classes
featureWeightsFeature Weights
gappyPairKernelGappy Pair Kernel
GappyPairKernel-classGappy Pair Kernel Class
genRandBioSeqsGenerate Random Biological Sequences
getPredictionProfile-methodsCalculation Of Predicition Profiles
getPredProfMixture-methodsCalculation Of Predicition Profiles for Mixture Kernels
heatmap-methodsHeatmap Methods
KBModelAccessorsKBModel Accessors
KBModel-classKeBABS Model Class
kbsvm-methodsKeBABS Training Methods
kebabsCollectInfoCollect KeBABS Package Information
kebabsDataKeBABS Sequence Data
kebabsOverviewkebabs
KernelMatrixAccessorsKernelMatrix Accessors
KernelMatrix-classKernel Matrix Class
LinearKernelLinear Kernel
mismatchKernelMismatch Kernel
MismatchKernel-classMismatch Kernel Class
ModelSelectionResultAccessorsModelSelectionResult Accessors
ModelSelectionResult-classModel Selection Result Class
motifKernelMotif Kernel
MotifKernel-classMotif Kernel Class
performCrossValidation-methodsKeBABS Cross Validation
performGridSearchKeBABS Grid Search
performModelSelectionKeBABS Model Selection
plot-methodsPlot Prediction Profiles, Cross Validation Result, Grid...
positionDependentKernelPosition Dependent Kernel
PredictionProfileAccessorsPredictionProfile Accessors
PredictionProfile-classPrediction Profile Class
predict-methodsKeBABS Prediction Methods
ROCDataAccessorsROCData Accessors
ROCData-classROC Data Class
sequenceKernelSequence Kernel
SequenceKernel-classSequence Kernel Class
show-methodsDisplay Various KeBABS Objects
spectrumKernelSpectrum Kernel
SpectrumKernel-classSpectrum Kernel Class
SVMAccessSVM Access for Training and Prediction
SVMInformation-classSVM Information Class
symmetricPairKernelSymmetric Pair Kernel
SymmetricPairKernel-classSymmetric Pair Kernel Class
kebabs documentation built on Nov. 17, 2017, 1:20 p.m.