plotPeakBox: Plot boxplot for each feature

Description Usage Arguments Value Author(s) Examples

Description

Plot boxplot for each feature

Usage

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plotPeakBox(para, samples, log = FALSE, ...)

Arguments

para

A metaXpara object

samples

Sample class used

log

Whether log transform or not

...

Additional parameters

Value

The output figure name.

Author(s)

Bo Wen wenbo@genomics.cn

Examples

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para <- new("metaXpara")
pfile <- system.file("extdata/MTBLS79.txt",package = "metaX")
sfile <- system.file("extdata/MTBLS79_sampleList.txt",package = "metaX")
rawPeaks(para) <- read.delim(pfile,check.names = FALSE)[1:20,]
sampleListFile(para) <- sfile
para <- reSetPeaksData(para)
para <- missingValueImpute(para)
addValueNorm(para) <- para
plotPeakBox(para,samples=c("S","C"))

metaX documentation built on Oct. 5, 2016, 4:41 a.m.

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