plotPeakBox: Plot boxplot for each feature

In metaX: An R package for metabolomic data analysis

Description

Plot boxplot for each feature

Usage

plotPeakBox(para, samples, log = FALSE, ...)

Arguments

para	A metaXpara object
samples	Sample class used
log	Whether log transform or not
...	Additional parameters

Value

The output figure name.

Author(s)

Bo Wen [e-mail]

Examples

para <- new("metaXpara")
pfile <- system.file("extdata/MTBLS79.txt",package = "metaX")
sfile <- system.file("extdata/MTBLS79_sampleList.txt",package = "metaX")
rawPeaks(para) <- read.delim(pfile,check.names = FALSE)[1:20,]
sampleListFile(para) <- sfile
para <- reSetPeaksData(para)
para <- missingValueImpute(para)
addValueNorm(para) <- para
plotPeakBox(para,samples=c("S","C"))

metaX documentation built on Oct. 5, 2016, 4:41 a.m.