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README.md
In metagene: A package to produce metagene plots
metagene: A package to produce metagene plots
This package produces metagene plots to compare the behavior of DNA-interacting proteins at selected groups of genes/features. Bam files are used to increase the resolution. Multiple combination of group of bam files and/or group of genomic regions can be compared in a single analysis. Bootstraping analysis is used to compare the groups and locate regions with statistically different enrichment profiles.
Bioconductor Package
metagene is now an official package of Bioconductor. The current release can be directly downloaded from their website:
Current release
Authors
Charles Joly Beauparlant,
Fabien Claude Lamaze,
Rawane Samb,
Astrid Deschenes and
Arnaud Droit.
See
Arnaud Droit Lab
website.
Maintainer
License
This package and the underlying metagene code are distributed under the
Artistic license 2.0. You are free to use and redistribute this software.
For more information on Artistic 2.0 License see
this webpage
Bugs/Feature requests
If you have any bugs or feature requests,
let us know. Thanks!
Try the metagene package in your browser
Any scripts or data that you put into this service are public.
metagene documentation built on Nov. 8, 2020, 5:37 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
metagene: A package to produce metagene plots
This package produces metagene plots to compare the behavior of DNA-interacting proteins at selected groups of genes/features. Bam files are used to increase the resolution. Multiple combination of group of bam files and/or group of genomic regions can be compared in a single analysis. Bootstraping analysis is used to compare the groups and locate regions with statistically different enrichment profiles.
Bioconductor Package
metagene is now an official package of Bioconductor. The current release can be directly downloaded from their website: Current release
Authors
Charles Joly Beauparlant, Fabien Claude Lamaze, Rawane Samb, Astrid Deschenes and Arnaud Droit.
See Arnaud Droit Lab website.
Maintainer
License
This package and the underlying metagene code are distributed under the Artistic license 2.0. You are free to use and redistribute this software.
For more information on Artistic 2.0 License see this webpage
Bugs/Feature requests
If you have any bugs or feature requests, let us know. Thanks!
Try the metagene package in your browser
Any scripts or data that you put into this service are public.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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