metagene: A package to produce metagene plots
Version 2.10.0

This package produces metagene plots to compare the behavior of DNA-interacting proteins at selected groups of genes/features. Bam files are used to increase the resolution. Multiple combination of group of bam files and/or group of genomic regions can be compared in a single analysis. Bootstraping analysis is used to compare the groups and locate regions with statistically different enrichment profiles.

Package details

AuthorCharles Joly Beauparlant <[email protected]>, Fabien Claude Lamaze <[email protected]>, Rawane Samb <[email protected]>, Cedric Lippens <[email protected]>, Astrid Louise Deschenes <[email protected]> and Arnaud Droit <[email protected]>.
Bioconductor views Alignment ChIPSeq Coverage Genetics MultipleComparison Sequencing
MaintainerCharles Joly Beauparlant <[email protected]>
LicenseArtistic-2.0 | file LICENSE
Version2.10.0
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("metagene")

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metagene documentation built on Nov. 17, 2017, 10:15 a.m.