metagene: A package to produce metagene plots

This package produces metagene plots to compare the behavior of DNA-interacting proteins at selected groups of genes/features. Bam files are used to increase the resolution. Multiple combination of group of bam files and/or group of genomic regions can be compared in a single analysis. Bootstraping analysis is used to compare the groups and locate regions with statistically different enrichment profiles.

Package details

AuthorCharles Joly Beauparlant <>, Fabien Claude Lamaze <>, Rawane Samb <>, Cedric Lippens <lippens.cedric@protonmail>, Astrid Louise Deschenes <> and Arnaud Droit <>.
Bioconductor views Alignment ChIPSeq Coverage Genetics MultipleComparison Sequencing
MaintainerCharles Joly Beauparlant <>
LicenseArtistic-2.0 | file LICENSE
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))


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metagene documentation built on Nov. 8, 2020, 5:37 p.m.