Files in metagenomeFeatures

Exploration of marker-gene sequence taxonomic annotations

README.md R/qiita_study_94_gg_ids.R R/phylo-class.R R/mock_mgF.R R/DNAStringSetOrNull-class.R R/utils.R R/gg13.8_85MgDb.R R/mgDb-taxa_accessors.R R/mock_query_df.R R/mgFeatures-class.R R/mgDb_method_annotateFeatures.R R/mgDb_method_select.R R/mgDb-class.R vignettes/retrieve-feature-data.Rmd vignettes/MgDb_and_mgFeatures_classes.Rmd vignettes/database-explore.Rmd man/mgFeatures-class.Rd man/mock_mgF.Rd man/newMgDb.Rd man/reexports.Rd man/annotateFeatures-MgDb-method.Rd man/select-MgDb-method.Rd man/MgDb-class.Rd man/make_mgdb_sqlite.Rd man/mgFeatures-methods.Rd man/taxa_.Rd man/MgDb-methods.Rd man/mock_query_df.Rd man/mgFeatures-accessors.Rd man/qiita_study_94_gg_ids.Rd man/get_gg13.8_85MgDb.Rd man/MgDb-accessor.Rd tests/testthat.R tests/testthat/test_mgFeatures-class.R tests/testthat/test_mdDb-annotateFeatures.R tests/testthat/test_mgDb-class.R tests/testthat/test_mgDb-select.R tests/testthat/test_agg_tax.R tests/testthat/helper-MgDb.R inst/doc/retrieve-feature-data.R inst/doc/database-explore.R inst/doc/retrieve-feature-data.Rmd inst/doc/MgDb_and_mgFeatures_classes.Rmd inst/doc/MgDb_and_mgFeatures_classes.R inst/doc/database-explore.Rmd inst/manuscript/manuscript_supplemental-initial-submission.Rmd inst/manuscript/manuscript_supplemental.Rmd inst/manuscript/manuscript_supplemental-initial-submission.pdf inst/scripts/make_greengenes13.8_97.R inst/scripts/make_testMgDb.R inst/scripts/make_mock_query_df.R inst/scripts/make_qitta_study_94_sample_data.R inst/scripts/make_qiita_study_94_gg_ids.R inst/scripts/make_mock_mgF.R inst/scripts/make_greengenes13.8_85.R