filterByPheno: Function to filter the MRexperiment by certain phenotype...
In microbiomeExplorer: Microbiome Exploration App
Description
Usage
Arguments
Value
Author(s)
Examples
Description
Function to filter the MRexperiment by certain phenotype values
Usage
1
filterByPheno(MRobj, rm_phenovalues)
Arguments
MRobj
the MRexperiment to subset
rm_phenovalues
list of named vectors with names corresponding to
column names in pData and values representing phenotypes within the column
Value
the filtered MRobj
Author(s)
Janina Reeder
Examples
1
2
3
data("mouseData", package = "metagenomeSeq")
filterByPheno(MRobj = mouseData,
rm_phenovalues = list("diet" = c("BK"),"mouseID" = c("PM1","PM10")))
microbiomeExplorer documentation built on Nov. 8, 2020, 8:16 p.m.
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Description Usage Arguments Value Author(s) Examples
Description
Function to filter the MRexperiment by certain phenotype values
Usage
1 | filterByPheno(MRobj, rm_phenovalues)
|
Arguments
MRobj |
the MRexperiment to subset |
rm_phenovalues |
list of named vectors with names corresponding to column names in pData and values representing phenotypes within the column |
Value
the filtered MRobj
Author(s)
Janina Reeder
Examples
1 2 3 | data("mouseData", package = "metagenomeSeq")
filterByPheno(MRobj = mouseData,
rm_phenovalues = list("diet" = c("BK"),"mouseID" = c("PM1","PM10")))
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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