signatures: Retrieve signatures from a musica_result object

In musicatk: Mutational Signature Comprehensive Analysis Toolkit

Description

The signature matrix contains the probability of mutation motif in each sample. Rows correspond to each motif and columns correspond to each signature.

Usage

signatures(result)

## S4 method for signature 'musica_result'
signatures(result)

signatures(result) <- value

## S4 replacement method for signature 'musica_result,matrix'
signatures(result) <- value

Arguments

result	A musica_result object generated by a mutational discovery or prediction tool.
value	A matrix of motifs counts by samples

Value

A matrix of mutational signatures

Examples

data(res)
signatures(res)
data(res)
signatures(res) <- matrix()

musicatk documentation built on Nov. 8, 2020, 5:16 p.m.