readBowtie: Import reads from a vector of Bowtie files

Description Usage Arguments Value Author(s)

Description

This function allows to load reads from Bowtie files from both single and paired-end commming from Next Generation Sequencing nucleosome mapping experiments.

Usage

1
readBowtie(files, type = "paired")

Arguments

files

List of input Bowtie files.

type

Describes the type of reads. Values allowed are single for single-ended reads and paired for pair-ended.

Value

GenomicRanges::GRangesList containing the reads of each input BAM file.

Author(s)

Ricard Illa ricard.illa@irbbarcelona.org


nucleR documentation built on Nov. 8, 2020, 8:24 p.m.