Files in nucleR

Nucleosome positioning package for R

README.md

NAMESPACE

DESCRIPTION

data/nucleosome_htseq.rda

data/nucleosome_tiling.rda

R/controlCorrection.R R/pcKeepCompDetect.R R/nucleR-package.R R/readBAM.R R/export.wig.R R/coverage.rpm.R R/fragmentLenDetect.R R/syntheticNucMap.R R/readBowtie.R R/helpers.R R/sample_data.R R/plotPeaks.R R/peakScoring.R R/processReads.R R/export.bed.R R/peakDetection.R R/mergeCalls.R R/filterFFT.R R/processTilingArray.R R/TODO/nucleoCluster-methods.R R/TODO/plotCoverOverlap.R man/peakScoring.Rd man/dot-fftRegion.Rd man/nucleosome_htseq.Rd man/filterFFT.Rd man/dot-loadPairedBam.Rd man/peakDetection.Rd man/processReads.Rd man/readBAM.Rd man/mergeCalls.Rd man/dot-vectorizedAll.Rd man/dot-processStrand.Rd man/processTilingArray.Rd man/dot-getThreshold.Rd man/controlCorrection.Rd man/nucleosome_tiling.Rd man/nucleR-package.Rd man/dot-loadSingleBam.Rd man/dot-xlapply.Rd man/pcKeepCompDetect.Rd man/readBowtie.Rd man/export.bed.Rd man/fragmentLenDetect.Rd man/coverage.rpm.Rd man/dot-mid.Rd man/plotPeaks.Rd man/dot-loadFiles.Rd man/syntheticNucMap.Rd man/export.wig.Rd man/dot-unlist_as_integer.Rd tests/testthat.R tests/testthat/test-coverage.rpm.R

inst/NEWS

inst/CITATION

inst/extdata/cellCycleM_chrII_5000-25000.bam

nucleR documentation built on Nov. 8, 2020, 8:24 p.m.