openCyto: Hierarchical Gating Pipeline for flow cytometry data

This package is designed to facilitate the automated gating methods in sequential way to mimic the manual gating strategy.

README.md An Introduction to the openCyto package How to write a csv gating template OpenCyto: How to use different auto gating functions

Vignettes Man pages API and functions Files

Package details
Author	Mike Jiang, John Ramey, Greg Finak, Raphael Gottardo
Bioconductor views	DataImport DataRepresentation FlowCytometry ImmunoOncology Preprocessing
Maintainer	Mike Jiang <wjiang2@fhcrc.org>,Jake Wagner <jpwagner@fhcrc.org>
License	Artistic-2.0
Version	2.2.0
Package repository	View on Bioconductor
Installation	Install the latest version of this package by entering the following in R: `if (!requireNamespace("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install("openCyto")`