tests/testthat/test_makeDS.R

library(pcaExplorer)

context("Check that example dds is generated correctly")

dds <- makeExampleDESeqDataSet_multifac(betaSD_condition = 3, betaSD_tissue = 1)

library(SummarizedExperiment)
expect_equal(names(colData(dds)), c("condition", "tissue"))

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pcaExplorer documentation built on Nov. 8, 2020, 5:29 p.m.