acquisitionDirectory: Ge the class organization of directory.

In proFIA: Preprocessing of FIA-HRMS data

Description

Find the classes organization of a directory, and return a table. This function is called by proFIAset, and is useful to check the structure which will be considered by a proFIAset object.

Usage

acquisitionDirectory(files = NULL)

Arguments

files

The path to the experiment directory/

Value

a table containing two columns, the absolute paths of the files and the classes of the acquisition, as given by subdirectories.

Examples

if(require(plasFIA)){
    path<-system.file(package="plasFIA","mzML")
    tabClasses<-acquisitionDirectory(path)
    tabClasses
}

proFIA documentation built on March 20, 2021, 6 p.m.