psygenet2r is an R package for query PsyGeNET database (www.psygenet.org) and perform co-morbidity studies within R framework.
This report is used for package distribution while we walk thought BioConductor publication process.
psygenet2r is already in Biocondcutor-devel.
While BioCondutor finish updating the package,
psygenet2r can be installed using
devtools from this repository:
The following lines show two examples of how PsyGeNET can be queried using
library(psygenet2r) qg <- psygenetGene(gene = 4852, database = "ALL", check = FALSE )
library(psygenet2r) qd <- psygenetDisease(disease = "schizophrenia", database = "ALL", evidenceIndex = c('>', 0.5) )
Any scripts or data that you put into this service are public.
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.