run_all: Will run all functions in the qckitfastq suite and save the...
In qckitfastq: FASTQ Quality Control
Description
Usage
Arguments
Value
Examples
Description
Will run all functions in the qckitfastq suite and save the data frames
and plots to a user-provided directory. Plot names are supplied by default.
Usage
1
Arguments
infile
Path to gzipped FASTQ file
dir
Directory to save results to
Value
Generate files from all functions
Examples
1
2
3
4
infile <- system.file("extdata", "test.fq.gz",
package = "qckitfastq")
testfolder <- tempdir()
run_all(infile, testfolder)
qckitfastq documentation built on Nov. 8, 2020, 5:24 p.m.
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Description Usage Arguments Value Examples
Description
Will run all functions in the qckitfastq suite and save the data frames and plots to a user-provided directory. Plot names are supplied by default.
Usage
1 |
Arguments
infile |
Path to gzipped FASTQ file |
dir |
Directory to save results to |
Value
Generate files from all functions
Examples
1 2 3 4 | infile <- system.file("extdata", "test.fq.gz",
package = "qckitfastq")
testfolder <- tempdir()
run_all(infile, testfolder)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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