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tests/testthat/test_plotCellMiner.R
In rcellminer: rcellminer: Molecular Profiles, Drug Response, and Chemical Structures for the NCI-60 Cell Lines
test_that("plotCellMiner", {
drugAct <- exprs(getAct(rcellminerData::drugData))
molDataMats <- getMolDataMatrices()
plotDataMats <- molDataMats[c("exp", "cop", "mut")]
file <- tempfile()
options(bitmapType="cairo")
pdf(file)
plotCellMiner(drugAct, plotDataMats, plots=c("mut", "drug", "cop"), nsc="94600", gene="TP53")
dev.off()
expect_true(file.exists(file))
})
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rcellminer documentation built on Nov. 26, 2020, 2:02 a.m.
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test_that("plotCellMiner", {
drugAct <- exprs(getAct(rcellminerData::drugData))
molDataMats <- getMolDataMatrices()
plotDataMats <- molDataMats[c("exp", "cop", "mut")]
file <- tempfile()
options(bitmapType="cairo")
pdf(file)
plotCellMiner(drugAct, plotDataMats, plots=c("mut", "drug", "cop"), nsc="94600", gene="TP53")
dev.off()
expect_true(file.exists(file))
})
Try the rcellminer package in your browser
Any scripts or data that you put into this service are public.
R Package Documentation
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We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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