Man pages for seqCAT
High Throughput Sequencing Cell Authentication Toolkit

calculate_similaritySNV profile similarity calculations
compare_manyComparisons of many SNV profiles
compare_profilesBinary SNV profile comparisons
create_profileSNV profile creation
create_profilesSNV profile creation
filter_duplicatesVariant de-duplication
filter_variantsVariant filtering
list_cosmicList COSMIC sample names
list_variantsList known variants
plot_heatmapPlot similarity heatmap
plot_impactsPlot SNV impact distribution
plot_variant_listPlot known variants list
read_cosmicRead COSMIC data
read_profileRead SNV profile
read_profilesRead SNV profiles
seqCATseqCAT: High Throughput Sequencing Cell Authentication...
test_comparisonOverlapping and compared SNVs
test_profile_1SNV profile 1
test_profile_2SNV profile 2
test_profile_3SNV profile 3
test_similaritiesCollated similarities object
test_variant_listModified variant list object
write_profileWrite SNV profile
write_profilesWrite SNV profiles
seqCAT documentation built on Nov. 8, 2020, 7:36 p.m.