DO_similarity: Calculate Disease Ontology (DO) semantic similarity matrix
In simplifyEnrichment: Simplify Functional Enrichment Results
Description
Usage
Arguments
Details
Value
Examples
View source: R/similarity_DO.R
Description
Calculate Disease Ontology (DO) semantic similarity matrix
Usage
1
DO_similarity(do_id, measure = "Rel")
Arguments
do_id
A vector of DO IDs.
measure
Semantic measurement for the DO similarity, pass to doSim.
Details
This function is basically a wrapper on doSim.
Value
A symmetric matrix.
Examples
1
2
3
require(DOSE)
do_id = random_DO(10)
DO_similarity(do_id)
simplifyEnrichment documentation built on Nov. 8, 2020, 5:07 p.m.
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Description Usage Arguments Details Value Examples
View source: R/similarity_DO.R
Description
Calculate Disease Ontology (DO) semantic similarity matrix
Usage
1 | DO_similarity(do_id, measure = "Rel")
|
Arguments
do_id |
A vector of DO IDs. |
measure |
Semantic measurement for the DO similarity, pass to |
Details
This function is basically a wrapper on doSim.
Value
A symmetric matrix.
Examples
1 2 3 | require(DOSE)
do_id = random_DO(10)
DO_similarity(do_id)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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