term_similarity_from_MSigDB: Similarity between MSigDB terms
In simplifyEnrichment: Simplify Functional Enrichment Results
Description
Usage
Arguments
Value
Examples
View source: R/similarity_by_overlap.R
Description
Similarity between MSigDB terms
Usage
1
term_similarity_from_MSigDB(term_id, category = NULL, subcategory = NULL, ...)
Arguments
term_id
A vector of MSigDB gene set names.
category
E.g., 'C1', 'C2', pass to msigdbr.
subcategory
E.g., 'CGP', 'BP', pass to msigdbr.
...
Pass to term_similarity.
Value
A symmetric matrix.
Examples
1
2
# There is no example
NULL
simplifyEnrichment documentation built on Nov. 8, 2020, 5:07 p.m.
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Description Usage Arguments Value Examples
View source: R/similarity_by_overlap.R
Description
Similarity between MSigDB terms
Usage
1 | term_similarity_from_MSigDB(term_id, category = NULL, subcategory = NULL, ...)
|
Arguments
term_id |
A vector of MSigDB gene set names. |
category |
E.g., 'C1', 'C2', pass to |
subcategory |
E.g., 'CGP', 'BP', pass to |
... |
Pass to |
Value
A symmetric matrix.
Examples
1 2 | # There is no example
NULL
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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