The package does hierarchical search for fixation mutations given multiple sequence alignment and phylogenetic tree. These fixation mutations can be specific to a phylogenetic lineages or shared by multiple lineages. The package also provides visualization of these mutations on the tree.
|Author||Chengyang Ji [aut, cre, cph] (<https://orcid.org/0000-0001-9258-5453>), Aiping Wu [ths]|
|Bioconductor views||Alignment MultipleSequenceAlignment Phylogenetics SNP Software|
|Maintainer||Chengyang Ji <email@example.com>|
|License||MIT + file LICENSE|
|Package repository||View on Bioconductor|
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