optimizeStyle: Optimize the style of plot

In trackViewer: A R/Bioconductor package with web interface for drawing elegant interactive tracks or lollipop plot to facilitate integrated analysis of multi-omics data

Description

Automatic optimize the stlye of trackViewer

Usage

optimizeStyle(trackList, viewerStyle = trackViewerStyle(), theme = NULL)

Arguments

trackList	An object of trackList
viewerStyle	An object of trackViewerStyle
theme	A character string. Could be "bw", "col" or "safe".

Value

a list of a trackList and a trackViewerStyle

See Also

See Also as viewTracks

Examples

extdata <- system.file("extdata", package="trackViewer",
                       mustWork=TRUE)
files <- dir(extdata, ".wig")
tracks <- lapply(paste(extdata, files, sep="/"), 
                 importScore, format="WIG")
re <- optimizeStyle(trackList(tracks))
trackList <- re$tracks
viewerStyle <- re$style

trackViewer documentation built on Feb. 11, 2021, 2 a.m.