as.treedata: as.treedata
In treeio: Base Classes and Functions for Phylogenetic Tree Input and Output

convert phylo to treedata

## S3 method for class 'phylo'
as.treedata(tree, boot = NULL, ...)

## S3 method for class 'pml'
as.treedata(tree, type = "ml", ...)

`tree`	input tree, a `phylo` object
`boot`	optional, can be bootstrap value from ape::boot.phylo
`...`	additional parameters
`type`	one of 'ml' and 'bayes' for inferring ancestral sequences

converting phylo object to treedata object

Guangchuang Yu

Yu Guangchuang

treeio documentation built on Nov. 21, 2020, 2:01 a.m.

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