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APackOfTheClones: Visualization of Clonal Expansion for Single Cell Immune Profiles
Visualize clonal expansion via circle-packing. 'APackOfTheClones' extends 'scRepertoire' to produce a publication-ready visualization of clonal expansion at a single cell resolution, by representing expanded clones as differently sized circles. The method was originally implemented by Murray Christian and Ben Murrell in the following immunology study: Ma et al. (2021) <doi:10.1126/sciimmunol.abg6356>.
Package details |
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| Author | Qile Yang [cre, aut, cph] (<https://orcid.org/0009-0005-0148-2499>) |
| Maintainer | Qile Yang <qile.yang@berkeley.edu> |
| License | MIT + file LICENSE |
| Version | 1.2.4 |
| URL | https://qile0317.github.io/APackOfTheClones/ https://github.com/Qile0317/APackOfTheClones https://joss.theoj.org/papers/10.21105/joss.06868 |
| Package repository | View on CRAN |
| Installation |
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