APackOfTheClones-package: APackOfTheClones: Visualization of Clonal Expansion for...

APackOfTheClones-packageR Documentation

APackOfTheClones: Visualization of Clonal Expansion for Single Cell Immune Profiles

Description

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Visualize clonal expansion via circle-packing. 'APackOfTheClones' extends 'scRepertoire' to produce a publication-ready visualization of clonal expansion at a single cell resolution, by representing expanded clones as differently sized circles. The method was originally implemented by Murray Christian and Ben Murrell in the following immunology study: Ma et al. (2021) \Sexpr[results=rd]{tools:::Rd_expr_doi("10.1126/sciimmunol.abg6356")}.

Author(s)

Maintainer: Qile Yang qile.yang@berkeley.edu (ORCID) [copyright holder]

See Also

Useful links:


APackOfTheClones documentation built on Oct. 11, 2024, 1:08 a.m.