Sanson_CRISPRn_A375: A benchmark CRISPRn pooled screen data from Sanson et al.

Description Usage Format Source

Description

A benchmark CRISPRn pooled screen data from Sanson et al.

Usage

1

Format

The data object is a list and contains below information:

count

The count matrix from Sanson et al.'s paper and contains the CRISPRn screening result using A375 cell-line. It contains a sample of plasimd, and three biological replicates after three weeks.

egenes

The list of 1,580 essential genes used in Sanson et al.'s study.

ngenes

The list of 927 non-essential genes used in Sanson et al.'s study.

design

The data.frame contains study design.

Source

https://www.ncbi.nlm.nih.gov/pubmed/30575746


CB2 documentation built on May 17, 2019, 1 a.m.