diff_gen_for3: Generate the F-statistics and ECF-statistics for the...
In COSINE: COndition SpecIfic sub-NEtwork

Description Usage Arguments Value Author(s) Examples

It works very similarly to "diff_gen" except that it performs the calculation across three rather than two datasets

1	diff_gen_for3(data1, data2, data3)

`data1`	The first dataset of gene expression profiles
`data2`	The second dataset of gene expression profiles
`data3`	The third dataset of gene expression profiles

A list containing:

`diff_expr`	a vector of the F-statistics for each gene
`diff_coex`	a square matrix storing the ECF-statistics for each gene pair

Haisu Ma

#Load the simulated datasets

data(simulated_data)

set1_data<-simulated_data[[1]]

set2_data<-simulated_data[[2]]

control_data<-simulated_data[[7]]

#Calculate the F-statistics and ECF-statistics 
#for the first five genes

diff_gen_for3_test <- diff_gen_for3(set1_data[,1:5],
set2_data[,1:5],control_data[,1:5])