get_quantiles_PPI: Get the five quantile values of lambda for analysis of gene...
In COSINE: COndition SpecIfic sub-NEtwork

Description Usage Arguments Value Author(s) Examples

Perform random sampling a large number of times to get the distribution of node score term and edge score term and calculate the quantiles of lambda

1	get_quantiles_PPI(scaled_node_score, scaled_edge_score, PPI, klist, pop_size)

`scaled_node_score`	The scaled F-statistics measuring the differential expression of each gene
`scaled_edge_score`	The scaled ECF-statistics measuring the differential correlation of each gene pair
`PPI`	The two column matrix containing the protein interaction pairs
`klist`	A list of size of random networks to be sampled
`pop_size`	The number of random networks to be sampled

A list containing two components:

`ratio`	The quantiles of the ratio of the edge score term and node score term
`lambda`	The quantiles of lambda

Haisu Ma

data(scaled_node_score)
data(scaled_edge_score)
data(PPI)
quantiles<-get_quantiles_PPI(scaled_node_score,scaled_edge_score,
PPI,klist=seq(50,60,by=5),pop_size=10)