get_quantiles_PPI: Get the five quantile values of lambda for analysis of gene...

Description Usage Arguments Value Author(s) Examples

View source: R/get_quantiles_PPI.R

Description

Perform random sampling a large number of times to get the distribution of node score term and edge score term and calculate the quantiles of lambda

Usage

1

Arguments

scaled_node_score

The scaled F-statistics measuring the differential expression of each gene

scaled_edge_score

The scaled ECF-statistics measuring the differential correlation of each gene pair

PPI

The two column matrix containing the protein interaction pairs

klist

A list of size of random networks to be sampled

pop_size

The number of random networks to be sampled

Value

A list containing two components:

ratio

The quantiles of the ratio of the edge score term and node score term

lambda

The quantiles of lambda

Author(s)

Haisu Ma

Examples

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COSINE documentation built on May 29, 2017, 1:40 p.m.