filter_genes: Filter genes

In DeLorean: Estimates Pseudotimes for Single Cell Expression Data

Description

Filter genes

Usage

filter_genes(dl, .filter = function(x) x %in% genes, number = NULL,
  genes = sample(rownames(dl$expr), number))

Arguments

dl	de.lorean object
.filter	Function that takes a list of genes as input and returns a vector of TRUE/FALSE
number	Number to sample if filter function or genes not supplied.
genes	The genes to keep.

Examples

data(WindramDeLorean)
dl <- de.lorean(windram.expr, windram.gene.meta, windram.cell.meta)
dl <- filter_genes(dl, number = 37)

DeLorean documentation built on May 2, 2019, 9:24 a.m.