Nothing
copyDataToTemp <- function(f0 = "M35NT2PM") {
sdf <- readNAEP(system.file("extdata/data", "M36NT2PM.dat", package = "NAEPprimer"))
sf <- system.file("extdata/data", "M36NT2PM.dat", package = "NAEPprimer")
sfs <- system.file("extdata/data", "M36NC2PM.dat", package = "NAEPprimer")
d0 <- tempdir()
d0 <- paste0(dirname(d0), "/", basename(d0))
d1 <- file.path(d0, "data")
dir.create(d1, showWarnings = FALSE)
f1 <- file.path(d1, paste0(f0, ".dat"))
file.create(f1)
schFilename <- f0
substr(schFilename, nchar(schFilename) - 3, nchar(schFilename) - 3) <- "C"
f1s <- file.path(d1, paste0(schFilename, ".dat"))
n <- nrow(sdf)
smp <- sort(sample(1:n, n, replace = TRUE))
line <- readLines(sf)
line <- line[smp]
writeChar(paste(line, collapse = "\n"), f1)
d2 <- file.path(d0, "select")
dir.create(d2, showWarnings = FALSE)
d3 <- file.path(d2, "parms")
dir.create(d3, showWarnings = FALSE)
od0 <- system.file("extdata/select/parms", "M36NT2PM.fr2", package = "NAEPprimer")
file.copy(from = od0, to = file.path(d3, paste0(f0, ".fr2")))
od0s <- system.file("extdata/select/parms", "M36NC2PM.fr2", package = "NAEPprimer")
file.copy(from = od0s, to = file.path(d3, paste0(schFilename, ".fr2")))
file.copy(from = sfs, to = f1s)
readNAEP(f1)
}
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