API for FSA
Simple Fisheries Stock Assessment Methods
| Global functions | |
|---|---|
| .onAttach | Man page Source code |
| BluegillJL | Man page |
| BrookTroutTH | Man page |
| ChinookArg | Man page |
| CodNorwegian | Man page |
| CutthroatAL | Man page |
| Ecoli | Man page |
| FSA | Man page |
| FSA-defunct | Man page |
| FSA-package | Man page |
| FSANews | Source code |
| Gompertz1 | Source code |
| Gompertz2 | Source code |
| Gompertz3 | Source code |
| Gompertz4 | Source code |
| Gompertz5 | Source code |
| Gompertz6 | Source code |
| Gompertz7 | Source code |
| GompertzFuns | Man page Source code |
| GrowthData1 | Man page |
| GrowthData2 | Man page |
| GrowthData3 | Man page |
| MESSAGE | Source code |
| Mirex | Man page |
| Mmethods | Man page Source code |
| PSDlit | Man page |
| PikeNY | Man page |
| PikeNYPartial1 | Man page |
| Richards1 | Source code |
| Richards2 | Source code |
| Richards3 | Source code |
| RichardsFuns | Man page Source code |
| SGompertz1 | Source code |
| SGompertz2 | Source code |
| SGompertz3 | Source code |
| SGompertz4 | Source code |
| SGompertz5 | Source code |
| SGompertz6 | Source code |
| SGompertz7 | Source code |
| SMBassLS | Man page |
| SMBassWB | Man page |
| SRichards1 | Source code |
| SRichards2 | Source code |
| SRichards3 | Source code |
| SSchnute1 | Source code |
| SSchnute2 | Source code |
| SSchnute3 | Source code |
| SSchnute4 | Source code |
| SSchnuteAll | Source code |
| SSchnuteRichards | Source code |
| STOP | Man page Source code |
| Schnute | Man page Source code |
| Schnute1 | Source code |
| Schnute2 | Source code |
| Schnute3 | Source code |
| Schnute4 | Source code |
| SchnuteAll | Source code |
| SchnuteRichards | Source code |
| Slogistic1 | Source code |
| Slogistic2 | Source code |
| Slogistic3 | Source code |
| Slogistic4 | Source code |
| SpotVA1 | Man page |
| Subset | Man page Source code |
| Summarize | Man page Source code |
| Summarize.default | Man page Source code |
| Summarize.formula | Man page Source code |
| SvonBertalanffy1 | Source code |
| SvonBertalanffy10 | Source code |
| SvonBertalanffy11 | Source code |
| SvonBertalanffy12 | Source code |
| SvonBertalanffy13 | Source code |
| SvonBertalanffy14 | Source code |
| SvonBertalanffy15 | Source code |
| SvonBertalanffy16 | Source code |
| SvonBertalanffy17 | Source code |
| SvonBertalanffy18 | Source code |
| SvonBertalanffy19 | Source code |
| SvonBertalanffy2 | Source code |
| SvonBertalanffy3 | Source code |
| SvonBertalanffy4 | Source code |
| SvonBertalanffy5 | Source code |
| SvonBertalanffy6 | Source code |
| SvonBertalanffy7 | Source code |
| SvonBertalanffy8 | Source code |
| SvonBertalanffy9 | Source code |
| WARN | Man page Source code |
| WR79 | Man page |
| WSlit | Man page |
| WhitefishLC | Man page |
| addZeroCatch | Man page Source code |
| ageBias | Man page Source code |
| agePrecision | Man page Source code |
| alkAgeDist | Man page Source code |
| alkIndivAge | Man page Source code |
| alkMeanVar | Man page Source code |
| alkPlot | Man page Source code |
| anova.catchCurve | Man page Source code |
| anova.depletion | Man page Source code |
| binCI | Man page Source code |
| boot | Man page |
| bootCase | Man page Source code |
| capFirst | Man page Source code |
| capHistConvert | Man page Source code |
| capHistSum | Man page Source code |
| catchCurve | Man page |
| catchCurve.default | Man page Source code |
| catchCurve.formula | Man page Source code |
| chapmanRobson | Man page |
| chapmanRobson.default | Man page Source code |
| chapmanRobson.formula | Man page Source code |
| chooseColors | Man page Source code |
| coef.catchCurve | Man page Source code |
| coef.chapmanRobson | Man page Source code |
| coef.depletion | Man page Source code |
| coef.removal | Man page Source code |
| col2rgbt | Man page Source code |
| compIntercepts | Man page Source code |
| compSlopes | Man page Source code |
| confint.boot | Man page Source code |
| confint.catchCurve | Man page Source code |
| confint.chapmanRobson | Man page Source code |
| confint.depletion | Man page Source code |
| confint.mrClosed1 | Man page Source code |
| confint.mrClosed2 | Man page Source code |
| confint.mrOpen | Man page Source code |
| confint.nlsBoot | Man page Source code |
| confint.removal | Man page Source code |
| depletion | Man page Source code |
| depletion.default | Man page Source code |
| depletion.formula | Man page Source code |
| diags | Man page Source code |
| dunnTest | Man page |
| dunnTest.default | Man page Source code |
| dunnTest.formula | Man page Source code |
| expandCounts | Man page Source code |
| expandLenFreq | Man page Source code |
| extraSS | Man page Source code |
| extraTests | Man page |
| fact2num | Man page Source code |
| filterD | Man page Source code |
| findGrowthStarts | Man page Source code |
| fishR | Man page Source code |
| fitPlot | Man page Source code |
| fsaNews | Man page |
| geomean | Man page Source code |
| geosd | Man page Source code |
| growthFunShow | Man page Source code |
| growthModels | Man page |
| headtail | Man page Source code |
| hist.boot | Man page Source code |
| hist.formula | Man page Source code |
| histFromSum | Man page |
| histFromSum.default | Man page Source code |
| histFromSum.formula | Man page Source code |
| histFromSum.table | Man page Source code |
| hoCoef | Man page Source code |
| htest | Man page Source code |
| htest.boot | Man page Source code |
| htest.nlsBoot | Man page Source code |
| hyperCI | Man page Source code |
| iABAddXHist | Source code |
| iABAddYHist | Source code |
| iABAxisLbls | Source code |
| iABAxisLmts | Source code |
| iABSetLayout | Source code |
| iALKAgeProp | Source code |
| iALKMean.BM | Source code |
| iALKMean.QD | Source code |
| iALKPlotArea | Source code |
| iALKPlotBar | Source code |
| iALKPlotBubble | Source code |
| iALKPlotLines | Source code |
| iALKPlotSplines | Source code |
| iAddLegend | Source code |
| iAddLoessLine | Man page Source code |
| iAddPSDLeg | Source code |
| iAdjKey4xlim | Source code |
| iAgeBiasDF | Source code |
| iAgeKey.CR | Source code |
| iAgeKey.SR | Source code |
| iBarplotAddLabelsToBars | Source code |
| iBowker | Source code |
| iBubbleFindIn | Source code |
| iBubbleUnmatKey | Source code |
| iBubblesAdd | Source code |
| iBurnham | Source code |
| iCI.CheckParm | Source code |
| iCI.MRCSingle | Source code |
| iCI1.HandleSuggested | Source code |
| iCI1.HandleVerbose | Source code |
| iCI2.HandleSuggested | Source code |
| iCI2.MRCSchnabel | Source code |
| iCI2.MRCSchumacher | Source code |
| iCIBoot | Source code |
| iCILabel | Man page Source code |
| iCIt | Source code |
| iCalc_tpr | Source code |
| iCalcr | Source code |
| iCalcz | Source code |
| iCapFirst | Source code |
| iCarleStrub | Source code |
| iChecLinfKOLD | Source code |
| iCheckALK | Man page Source code |
| iCheckCatchEffort | Source code |
| iCheckConfLevel | Source code |
| iCheckIndvec | Source code |
| iCheckKOLD | Source code |
| iCheckMBbot | Source code |
| iCheckMBtop | Source code |
| iCheckMultColor | Man page Source code |
| iCheckPtbl | Source code |
| iCheckRegSig | Source code |
| iCheckStartcat | Source code |
| iCheckStartcatW | Man page Source code |
| iCheckW | Source code |
| iCheck_K | Source code |
| iCheck_L | Source code |
| iCheck_Linf | Source code |
| iCheck_PS | Source code |
| iCheck_Temp | Source code |
| iCheck_Winf | Source code |
| iCheck_ages2use | Source code |
| iCheck_b | Source code |
| iCheck_t0 | Source code |
| iCheck_t50 | Source code |
| iCheck_tmax | Source code |
| iChk4Geos | Source code |
| iChkComplexModel | Source code |
| iChkConstvals | Source code |
| iChkCumSum | Source code |
| iChkGT | Source code |
| iChkGTE | Source code |
| iChkK | Source code |
| iChkL0 | Source code |
| iChkLT | Source code |
| iChkLTE | Source code |
| iChkLinf | Source code |
| iChkParamBtwn | Source code |
| iChkParamPos | Source code |
| iChkt0 | Source code |
| iDeLury | Source code |
| iDiffAB | Source code |
| iDiffBA | Source code |
| iEstB | Source code |
| iEstM | Source code |
| iEstN | Source code |
| iEstPhi | Source code |
| iEvansHoenig | Source code |
| iEvent2Indiv | Source code |
| iExpandCHString | Source code |
| iFindAgesAndLens | Source code |
| iFitWalford | Source code |
| iFrequency2Indiv | Source code |
| iGetAllDependencies | Source code |
| iGetAllPSD | Source code |
| iGetDecimals | Man page Source code |
| iGetFi | Source code |
| iGetUi | Source code |
| iGetVarFromFormula | Man page Source code |
| iGetVi | Source code |
| iGompStarts | Source code |
| iHTestBoot | Source code |
| iHandleAgreeTable | Source code |
| iHndlAddNames | Source code |
| iHndlCols2UseIgnore | Man page Source code |
| iHndlFormula | Man page Source code |
| iHndlGrowthModelParams | Source code |
| iHndlMultWhat | Man page Source code |
| iHndlRemovalParms | Source code |
| iHndlbeta | Source code |
| iHndlt0 | Source code |
| iIndividual2Indiv | Source code |
| iLHMoran | Source code |
| iLHSchnute | Source code |
| iLegendHelp | Man page Source code |
| iLeslie | Source code |
| iLinesAddLabelsToLines | Source code |
| iListSpecies | Man page Source code |
| iLogiStarts | Source code |
| iMRCMultiple | Source code |
| iMRCSingle | Source code |
| iMRCSingleVar | Source code |
| iMakeColor | Man page Source code |
| iMakeDefaultCHLabels | Source code |
| iMakeEqnGomp1 | Source code |
| iMakeEqnGomp2 | Source code |
| iMakeEqnGomp3 | Source code |
| iMakeEqnGomp4 | Source code |
| iMakeEqnGomp5 | Source code |
| iMakeEqnGomp6 | Source code |
| iMakeEqnGomp7 | Source code |
| iMakeEqnLogi1 | Source code |
| iMakeEqnLogi2 | Source code |
| iMakeEqnLogi3 | Source code |
| iMakeEqnLogi4 | Source code |
| iMakeEqnRich1 | Source code |
| iMakeEqnRich2 | Source code |
| iMakeEqnRich3 | Source code |
| iMakeEqnSchnRich | Source code |
| iMakeEqnSchnute | Source code |
| iMakeEqnVB1 | Source code |
| iMakeEqnVB10 | Source code |
| iMakeEqnVB11 | Source code |
| iMakeEqnVB12 | Source code |
| iMakeEqnVB13 | Source code |
| iMakeEqnVB14 | Source code |
| iMakeEqnVB15 | Source code |
| iMakeEqnVB16 | Source code |
| iMakeEqnVB17 | Source code |
| iMakeEqnVB18 | Source code |
| iMakeEqnVB2 | Source code |
| iMakeEqnVB3 | Source code |
| iMakeEqnVB4 | Source code |
| iMakeEqnVB5 | Source code |
| iMakeEqnVB6 | Source code |
| iMakeEqnVB7 | Source code |
| iMakeEqnVB8 | Source code |
| iMakeFilename | Source code |
| iMakeItemsToRemove | Source code |
| iMakeLWPred | Source code |
| iMakeModelHeading | Source code |
| iMakePSDIV | Source code |
| iMakePSDLabels | Source code |
| iMakeVarLabels | Source code |
| iMakeVname | Source code |
| iMark2Indiv | Source code |
| iMarray | Source code |
| iMcNemar | Source code |
| iMethodBBot | Source code |
| iMethodBTop | Source code |
| iMode | Source code |
| iMoran | Source code |
| iOddEven | Source code |
| iOutEvent | Source code |
| iOutFrequency | Source code |
| iOutIndividual | Source code |
| iOutMARK | Source code |
| iOutRMark | Source code |
| iPSDCIbinom | Source code |
| iPSDCImultinom | Source code |
| iPSDGetSpecies | Source code |
| iPlotABCamp | Source code |
| iPlotABNum | Source code |
| iPlotExists | Man page Source code |
| iPlotGrowStarts | Source code |
| iPlotGrowStartsOLD | Source code |
| iPlotLWPred | Source code |
| iPredictBoot | Source code |
| iPrepCapHistSum | Source code |
| iPrepData4PSD | Source code |
| iProcessSessionInfo | Source code |
| iRMark2Indiv | Source code |
| iRemovalKTX | Source code |
| iRemovalLHCI | Source code |
| iRemovalNCI | Source code |
| iReproInfoLaTeX | Source code |
| iReproInfoMarkdown | Source code |
| iReproInfoR | Source code |
| iRichStarts | Source code |
| iRobsonRegier2 | Source code |
| iRoundCoefs | Source code |
| iSGF_GOMP_OLD | Source code |
| iSGF_LOGISTIC_OLD | Source code |
| iSGF_RICHARDS_OLD | Source code |
| iSGF_SCHNUTERICHARDS_OLD | Source code |
| iSGF_SCHNUTE_OLD | Source code |
| iSGF_VB_OLD | Source code |
| iSRS_BH | Source code |
| iSRS_RICKER | Source code |
| iSRS_SHEPHERD | Source code |
| iSRS_SL | Source code |
| iSRStartsBH | Source code |
| iSRStartsI | Source code |
| iSRStartsPlot | Source code |
| iSRStartsR | Source code |
| iSRStartsS | Source code |
| iSRStartsSL | Source code |
| iSameModelClass | Source code |
| iSchnStarts | Source code |
| iSchnute | Source code |
| iSeber2 | Source code |
| iSeber3 | Source code |
| iStrCollapse | Source code |
| iSumCH | Source code |
| iSumCHnum | Source code |
| iSumCHnumPetersen | Source code |
| iSumCHnumSchnabel | Source code |
| iSummarizeQ1 | Source code |
| iSummarizeQf | Source code |
| iTypeoflm | Man page Source code |
| iVBStarts.Francis | Source code |
| iVBStarts.GQ | Source code |
| iVBStarts.K | Source code |
| iVBStarts.L0 | Source code |
| iVBStarts.Linf | Source code |
| iVBStarts.Ls | Source code |
| iVBStarts.Mooij | Source code |
| iVBStarts.Ogle | Source code |
| iVBStarts.Pauly | Source code |
| iVBStarts.Schnute | Source code |
| iVBStarts.Somers | Source code |
| iVBStarts.Somers2 | Source code |
| iVBStarts.Weisberg | Source code |
| iVBStarts.original | Source code |
| iVBStarts.t0 | Source code |
| iVBStarts.typical | Source code |
| iVonBStarts | Source code |
| iZippin | Source code |
| iZippinNoVar | Source code |
| iZippinpVar | Source code |
| is.CapHist | Man page Source code |
| is.even | Man page Source code |
| is.gt | Source code |
| is.gte | Source code |
| is.lt | Source code |
| is.lte | Source code |
| is.odd | Man page |
| is.wholenumber | Man page Source code |
| jolly | Man page Source code |
| kCounts | Man page Source code |
| kPvalue | Man page Source code |
| ksTest | Man page |
| ksTest.default | Man page Source code |
| ksTest.formula | Man page Source code |
| lagratio | Man page Source code |
| lencat | Man page |
| lencat.default | Man page Source code |
| lencat.formula | Man page Source code |
| logbtcf | Man page Source code |
| logistic1 | Source code |
| logistic2 | Source code |
| logistic3 | Source code |
| logistic4 | Source code |
| logisticFuns | Man page Source code |
| lrt | Man page Source code |
| lwCompPreds | Man page Source code |
| makeGrowthFun | Man page Source code |
| mapvalues | Man page Source code |
| metaM | Man page Source code |
| metaM1 | Source code |
| mrClosed | Man page Source code |
| mrOpen | Man page Source code |
| nlsBoot | Man page |
| nlsTracePlot | Man page Source code |
| pcumsum | Man page Source code |
| peek | Man page Source code |
| perc | Man page Source code |
| plot.CapHist | Man page Source code |
| plot.ageBias | Man page Source code |
| plot.agePrec | Man page |
| plot.boot | Man page |
| plot.catchCurve | Man page Source code |
| plot.chapmanRobson | Man page Source code |
| plot.depletion | Man page Source code |
| plot.mrClosed2 | Man page Source code |
| plotAB | Man page Source code |
| plotBinResp | Man page Source code |
| poiCI | Man page Source code |
| predict.boot | Man page Source code |
| predict.nlsBoot | Man page Source code |
| print.dunnTest | Man page Source code |
| print.extraTest | Man page Source code |
| psdAdd | Man page |
| psdAdd.default | Man page Source code |
| psdAdd.formula | Man page Source code |
| psdCI | Man page Source code |
| psdCalc | Man page Source code |
| psdPlot | Man page Source code |
| psdVal | Man page Source code |
| purl2 | Man page Source code |
| rSquared | Man page Source code |
| rSquared.catchCurve | Man page Source code |
| rSquared.default | Man page Source code |
| rSquared.depletion | Man page Source code |
| rSquared.lm | Man page Source code |
| rcumsum | Man page Source code |
| removal | Man page Source code |
| removal.default | Man page Source code |
| removal.formula | Man page Source code |
| repeatedRows2Keep | Man page Source code |
| reproInfo | Man page Source code |
| residPlot | Man page Source code |
| se | Man page |
| showGrowthFun | Man page Source code |
| srFunShow | Man page Source code |
| srFuns | Man page Source code |
| srStarts | Man page Source code |
| sumTable | Man page |
| sumTable.formula | Man page Source code |
| summary.ageBias | Man page Source code |
| summary.agePrec | Man page Source code |
| summary.catchCurve | Man page Source code |
| summary.chapmanRobson | Man page Source code |
| summary.depletion | Man page Source code |
| summary.mrClosed1 | Man page Source code |
| summary.mrClosed2 | Man page Source code |
| summary.mrOpen | Man page Source code |
| summary.removal | Man page Source code |
| tictactoe | Man page Source code |
| validn | Man page Source code |
| vbFuns | Man page Source code |
| vbStarts | Man page Source code |
| vonBertalanffy1 | Source code |
| vonBertalanffy10 | Source code |
| vonBertalanffy11 | Source code |
| vonBertalanffy12 | Source code |
| vonBertalanffy13 | Source code |
| vonBertalanffy14 | Source code |
| vonBertalanffy15 | Source code |
| vonBertalanffy16 | Source code |
| vonBertalanffy17 | Source code |
| vonBertalanffy18 | Source code |
| vonBertalanffy19 | Source code |
| vonBertalanffy2 | Source code |
| vonBertalanffy3 | Source code |
| vonBertalanffy4 | Source code |
| vonBertalanffy5 | Source code |
| vonBertalanffy6 | Source code |
| vonBertalanffy7 | Source code |
| vonBertalanffy8 | Source code |
| vonBertalanffy9 | Source code |
| wrAdd | Man page |
| wrAdd.default | Man page Source code |
| wrAdd.formula | Man page Source code |
| wsVal | Man page Source code |
