Man pages for Fragman
Fragment Analysis in R

arrange.jmArrange data converted to joinmap code into a joinmap...
best.layoutcomplementary tools for layout
big.peaks.colPeak search by first derivatives
detect.ladderLadder detection by correlation or confidence intervals
find.ladderLadder detection by correlation or confidence intervals
Fragman-packageFragment analysis and automatic scoring
get.scorescomplementary tools
homogenize.to.parentalscomplementary tools
homo.panelcomplementary tools
jm.convScores to JoinMap converter
ladder.correctorLadder corrector attached to R environment
ladder.info.attachLadder detection and attachment to R environment
lapply_pbcomplementary tools for Fragman
letter.to.jmLetter to JoinMap code converter
my.plantsCranberry biparental population
num.to.lettNumber to Letter code converter
overviewAssesing several plants with an overview
overview2Assesing several plants with an overview
pullupApplying pullup to channels/colors
read.abifRead ABIF formatted files
realsFinding the real peaks
saturateChecking and correcting saturated peaks
score.easyFragment analysis scoring
separateSeparating peaks by a shift window
storing.indsExtracting channel information
threshsCustomizing thresholds
transfftApplying the fourier transformation to a data frame
transpCreating color with transparency
Fragman documentation built on May 29, 2017, 5:21 p.m.