QTLmarkers: Candidate markers identified by GWAS associated with...

In GALLO: Genomic Annotation in Livestock for Positional Candidate LOci

Description

Data from a systematic review which evaluated 18 articles regarding genome-wide association studies for male fertility traits in beef and dairy cattle

Usage

data(QTLmarkers)

Format

A data frame with 141 rows and 7 variables:

• Associated.marker: Significantly associated marker

• SNP.reference: The rs ID when available

• Trait: Trait associated

• CHR: Chromosome

• BP: Chromosomal position in base pairs (bovine reference assembly UMD3.1)

• Breed: Breed used in the study

• Reference: Study which the markers were retrieved

References

Fonseca et al. (2018) Journal of Animal Science, Volume 96, Issue 12, December 2018, Pages 4978–4999. (doi: 10.1093/jas/sky382PubMed)

Examples

data(QTLmarkers)

GALLO documentation built on Nov. 10, 2021, 1:07 a.m.