sub_genes_windows: Sub-function to search genes around candidate markers

Description Usage Arguments Value

View source: R/sub_genes_windows.R

Description

Takes a list of candidate markers and search for genes a determined interval

Usage

1
sub_genes_windows(chr_list, db_file, marker_file, nThreads = NULL, int = 0)

Arguments

chr_list

"Object with the chromosomes to be analyzed"

db_file

Data frame with the information from .gtf file

marker_file

Data frame with the information from the candidate regions file

nThreads

The number of threads to be used

int

The interval in base pair

Value

A dataframe with the genes or QTLs mapped within the specified intervals


GALLO documentation built on April 8, 2021, 5:08 p.m.