GCAI.bias: Guided Correction Approach for Inherited bias (GCAI.bias)
Version 1.0

Many inherited biases and effects exists in RNA-seq due to both biological and technical effects. We observed the biological variance of testing target transcripts can influence the yield of sequencing reads, which might indicate a resource competition existing in RNA-seq. We developed this package to capture the bias depending on local sequence and perform the correction of this type of bias by borrowing information from spike-in measurement.

Package details

AuthorGuoshuai Cai
Date of publication2014-07-16 01:07:26
MaintainerGuoshuai Cai <[email protected]>
LicenseGPL (>= 2)
Version1.0
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("GCAI.bias")

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GCAI.bias documentation built on May 29, 2017, 11:02 a.m.