train.dat.seq: Training Sequence Index Dataset
In GCAI.bias: Guided Correction Approach for Inherited bias (GCAI.bias)
Description
Usage
Format
References
Examples
Description
An example, a data frame of sequence index of training samples
Usage
1
Format
A data frame with 5203 observations on the following 85 variables.
genea factor with levels ERCC-00002 ERCC-00003 ERCC-00007 ERCC-00009 ERCC-00012 ERCC-00013 ERCC-00014 ERCC-00016 ERCC-00017 ERCC-00018 ERCC-00019 ERCC-00022 ERCC-00023 ERCC-00024 ERCC-00025 ERCC-00028 ERCC-00031 ERCC-00033 ERCC-00034 ERCC-00035 ERCC-00039 ERCC-00040 ERCC-00041 ERCC-00042 ERCC-00044 ERCC-00048 ERCC-00054 ERCC-00058 ERCC-00061 ERCC-00079 ERCC-00171
posa numeric vector
code_stranda factor with levels +
seq_stranda factor with levels S
X1a numeric vector
X2a numeric vector
X3a numeric vector
X4a numeric vector
X5a numeric vector
X6a numeric vector
X7a numeric vector
X8a numeric vector
X9a numeric vector
X10a numeric vector
X11a numeric vector
X12a numeric vector
X13a numeric vector
X14a numeric vector
X15a numeric vector
X16a numeric vector
X17a numeric vector
X18a numeric vector
X19a numeric vector
X20a numeric vector
X21a numeric vector
X22a numeric vector
X23a numeric vector
X24a numeric vector
X25a numeric vector
X26a numeric vector
X27a numeric vector
X28a numeric vector
X29a numeric vector
X30a numeric vector
X31a numeric vector
X32a numeric vector
X33a numeric vector
X34a numeric vector
X35a numeric vector
X36a numeric vector
X37a numeric vector
X38a numeric vector
X39a numeric vector
X40a numeric vector
X41a numeric vector
X42a numeric vector
X43a numeric vector
X44a numeric vector
X45a numeric vector
X46a numeric vector
X47a numeric vector
X48a numeric vector
X49a numeric vector
X50a numeric vector
X51a numeric vector
X52a numeric vector
X53a numeric vector
X54a numeric vector
X55a numeric vector
X56a numeric vector
X57a numeric vector
X58a numeric vector
X59a numeric vector
X60a numeric vector
X61a numeric vector
X62a numeric vector
X63a numeric vector
X64a numeric vector
X65a numeric vector
X66a numeric vector
X67a numeric vector
X68a numeric vector
X69a numeric vector
X70a numeric vector
X71a numeric vector
X72a numeric vector
X73a numeric vector
X74a numeric vector
X75a numeric vector
X76a numeric vector
X77a numeric vector
X78a numeric vector
X79a numeric vector
X80a numeric vector
X81a numeric vector
References
Cai G, RNA-SEQUENCING APPLICATIONS: GENE EXPRESSION QUANTIFICATION AND METHYLATOR PHENOTYPE IDENTIFICATION, Ph.D. Thesis, 2013
Examples
1
GCAI.bias documentation built on May 1, 2019, 8:18 p.m.
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Description Usage Format References Examples
Description
An example, a data frame of sequence index of training samples
Usage
1 |
Format
A data frame with 5203 observations on the following 85 variables.
genea factor with levels
ERCC-00002ERCC-00003ERCC-00007ERCC-00009ERCC-00012ERCC-00013ERCC-00014ERCC-00016ERCC-00017ERCC-00018ERCC-00019ERCC-00022ERCC-00023ERCC-00024ERCC-00025ERCC-00028ERCC-00031ERCC-00033ERCC-00034ERCC-00035ERCC-00039ERCC-00040ERCC-00041ERCC-00042ERCC-00044ERCC-00048ERCC-00054ERCC-00058ERCC-00061ERCC-00079ERCC-00171posa numeric vector
code_stranda factor with levels
+seq_stranda factor with levels
SX1a numeric vector
X2a numeric vector
X3a numeric vector
X4a numeric vector
X5a numeric vector
X6a numeric vector
X7a numeric vector
X8a numeric vector
X9a numeric vector
X10a numeric vector
X11a numeric vector
X12a numeric vector
X13a numeric vector
X14a numeric vector
X15a numeric vector
X16a numeric vector
X17a numeric vector
X18a numeric vector
X19a numeric vector
X20a numeric vector
X21a numeric vector
X22a numeric vector
X23a numeric vector
X24a numeric vector
X25a numeric vector
X26a numeric vector
X27a numeric vector
X28a numeric vector
X29a numeric vector
X30a numeric vector
X31a numeric vector
X32a numeric vector
X33a numeric vector
X34a numeric vector
X35a numeric vector
X36a numeric vector
X37a numeric vector
X38a numeric vector
X39a numeric vector
X40a numeric vector
X41a numeric vector
X42a numeric vector
X43a numeric vector
X44a numeric vector
X45a numeric vector
X46a numeric vector
X47a numeric vector
X48a numeric vector
X49a numeric vector
X50a numeric vector
X51a numeric vector
X52a numeric vector
X53a numeric vector
X54a numeric vector
X55a numeric vector
X56a numeric vector
X57a numeric vector
X58a numeric vector
X59a numeric vector
X60a numeric vector
X61a numeric vector
X62a numeric vector
X63a numeric vector
X64a numeric vector
X65a numeric vector
X66a numeric vector
X67a numeric vector
X68a numeric vector
X69a numeric vector
X70a numeric vector
X71a numeric vector
X72a numeric vector
X73a numeric vector
X74a numeric vector
X75a numeric vector
X76a numeric vector
X77a numeric vector
X78a numeric vector
X79a numeric vector
X80a numeric vector
X81a numeric vector
References
Cai G, RNA-SEQUENCING APPLICATIONS: GENE EXPRESSION QUANTIFICATION AND METHYLATOR PHENOTYPE IDENTIFICATION, Ph.D. Thesis, 2013
Examples
1 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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