Description Usage Arguments Value Author(s) References See Also Examples
To extract position and count information from train.dat.counts
or test.dat.counts
1 | counts.preprocess(mat.counts)
|
mat.counts |
a dataframe of train.dat.counts or test.dat.counts |
counts.preprocess return a list containing components:
|
a matrix of counts |
|
a matrix of positions |
Guoshuai Cai
Cai G, RNA-SEQUENCING APPLICATIONS: GENE EXPRESSION QUANTIFICATION AND METHYLATOR PHENOTYPE IDENTIFICATION, Ph.D. Thesis, 2013
train.dat.counts
,test.dat.counts
1 2 3 4 5 | data(train.dat.counts)
obj.train<-counts.preprocess(train.dat.counts)
data(test.dat.counts)
obj.test<-counts.preprocess(test.dat.counts)
|
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